TAP CCAAT_HAP5 (NF-YC) in Capsella grandiflora

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

NF-YC
CCAAT-Dr1_Domain
NF-YB
HMG_box

(Domain names are clickable)



List of proteins (11)

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namename additionClick button to show/hide sequence: Download sequence?
Cagra.0134s0008.1.ppacid=28915256 transcript=Cagra.0134s0008.1 locus=Cagra.0134s0008 ID=Cagra.0134s0008.1.v1.1 annot-version=v1.1
Cagra.0248s0024.1.ppacid=28918890 transcript=Cagra.0248s0024.1 locus=Cagra.0248s0024 ID=Cagra.0248s0024.1.v1.1 annot-version=v1.1
Cagra.0445s0002.1.ppacid=28912376 transcript=Cagra.0445s0002.1 locus=Cagra.0445s0002 ID=Cagra.0445s0002.1.v1.1 annot-version=v1.1
Cagra.1268s0051.1.ppacid=28893611 transcript=Cagra.1268s0051.1 locus=Cagra.1268s0051 ID=Cagra.1268s0051.1.v1.1 annot-version=v1.1
Cagra.1310s0011.1.ppacid=28904766 transcript=Cagra.1310s0011.1 locus=Cagra.1310s0011 ID=Cagra.1310s0011.1.v1.1 annot-version=v1.1
Cagra.1637s0006.1.ppacid=28897794 transcript=Cagra.1637s0006.1 locus=Cagra.1637s0006 ID=Cagra.1637s0006.1.v1.1 annot-version=v1.1
Cagra.16435s0008.1.ppacid=28912455 transcript=Cagra.16435s0008.1 locus=Cagra.16435s0008 ID=Cagra.16435s0008.1.v1.1 annot-version=v1.1
Cagra.18742s0003.1.ppacid=28908133 transcript=Cagra.18742s0003.1 locus=Cagra.18742s0003 ID=Cagra.18742s0003.1.v1.1 annot-version=v1.1
Cagra.25491s0001.1.ppacid=28919882 transcript=Cagra.25491s0001.1 locus=Cagra.25491s0001 ID=Cagra.25491s0001.1.v1.1 annot-version=v1.1
Cagra.4395s0081.1.ppacid=28898255 transcript=Cagra.4395s0081.1 locus=Cagra.4395s0081 ID=Cagra.4395s0081.1.v1.1 annot-version=v1.1
Cagra.5641s0011.1.ppacid=28908436 transcript=Cagra.5641s0011.1 locus=Cagra.5641s0011 ID=Cagra.5641s0011.1.v1.1 annot-version=v1.1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum